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Abstract

Ecological intensification is a new concept in agriculture that addresses the double challenge of maintaining a level of production sufficient to support needs of human populations and respecting the environment in order to conserve the natural world and human quality of life. This article adapts...

Author(s)
Aubin, J.; Callier, M.; Rey-Valette, H.; Mathé, S.; Wilfart, A.; Legendre, M.; Slembrouck, J.; Caruso, D.; Chia, E.; Masson, G.; Blancheton, J. P.; Ediwarman; Haryadi, J.; Prihadi, T. H.; Casaca, J. de M.; Tamassia, S. T. J.; Tocqueville, A.; Fontaine, P.
Publisher
Wiley, Melbourne, Australia
Citation
Reviews in Aquaculture, 2019, 11, 1, pp 149-167, 287
Abstract

As an important economic natural resource in Southeast Asia, reticulated pythons (Malayopython reticulatus ssp.) are primarily harvested from the wild for their skins - which are prized in the luxury leather goods industry. Trade dynamics of this CITES Appendix II listed species are complex and...

Author(s)
Murray-Dickson, G.; Ghazali, M.; Ogden, R.; Brown, R.; Auliya, M.
Publisher
Public Library of Sciences (PLoS), San Francisco, USA
Citation
PLoS ONE, 2017, 12, 8, pp e0182049
Abstract

Like Chinese Silkie, Indonesian Ayam Cemani exhibits fibromelanosis or dermal hyperpigmentation and possesses complex segmental duplications on chromosome 20 that involve the endothelin 3 gene, EDN3. A genomic region, DR1 of 127 kb, together with another region, DR2 of 171 kb, was duplicated by...

Author(s)
Dharmayanthi, A. B.; Terai, Y.; Sulandari, S.; Zein, M. S. A.; Akiyama, T.; Satta, Y.
Publisher
Public Library of Sciences (PLoS), San Francisco, USA
Citation
PLoS ONE, 2017, 12, 4, pp e0173147
Abstract

Simian foamy viruses (SFVs) infect most nonhuman primate species and appears to co-evolve with its hosts. This co-evolutionary signal is particularly strong among great apes, including orangutans (genus Pongo). Previous studies have identified three distinct orangutan SFV clades. The first of these ...

Author(s)
Reid, M. J. C.; Switzer, W. M.; Schillaci, M. A.; Klegarth, A. R.; Campbell, E.; Ragonnet-Cronin, M.; Joanisse, I.; Caminiti, K.; Lowenberger, C. A.; Galdikas, B. M. F.; Hollocher, H.; Sandstrom, P. A.; Brooks, J. I.
Publisher
Elsevier B.V., Amsterdam, Netherlands
Citation
Infection, Genetics and Evolution, 2017, 51, pp 54-66
Abstract

Highly pathogenic avian influenza (HPAI) viruses of the H5N1 subtype are a major concern to human and animal health in Indonesia. This study aimed to characterize transmission dynamics of H5N1 over time using novel Bayesian phylogeography methods to identify factors which have influenced the spread ...

Author(s)
Njoto, E. N.; Scotch, M.; Bui, C. M.; Adam, D. C.; Chughtai, A. A.; MacIntyre, C. R.
Publisher
Wiley, Berlin, Germany
Citation
Transboundary and Emerging Diseases, 2018, 65, 5, pp 1339-1347
Abstract

The genetic information obtained from the mitochondrial DNA D-loop region has paramount importance in understanding the evolution of closely related individuals, and designing proper breeding or conservation plans. The present study was conducted using partial D-loop sequences of three local...

Author(s)
Sahu, P. K.; Das, B.; Sahoo, L.; Senapati, S.; Nayak, G. D.
Publisher
Taylor & Francis, Abingdon, UK
Citation
Mitochondrial DNA Part A, 2016, 27, 4, pp 2986-2988
Abstract

Bat species represent natural reservoirs for a number of high-consequence human pathogens. The present study investigated the diversity of polyomaviruses (PyVs) in Zambian insectivorous and fruit bat species. We describe the complete genomes from four newly proposed African bat PyV species...

Author(s)
Carr, M.; Gonzalez, G.; Sasaki, M.; Ito, K.; Ishii, A.; Hang'ombe, B. M.; Mweene, A. S.; Orba, Y.; Sawa, H.
Publisher
Microbiology Society, London, UK
Citation
Journal of General Virology, 2017, 98, 4, pp 726-738
AbstractFull Text

Bali cattle (Bos javanicus) are a type of beef cattle native to Indonesia. Their size is relatively smaller (300-600 kg) than those of Bos taurus, but Bali cattle have high adaptability to tropical conditions, especially against some diseases. Efforts have been done to study the physiology of Bali...

Author(s)
Depamede, S. N.
Publisher
OMICS Publishing Group, Los Angeles, USA
Citation
Journal of Veterinary Science and Technology, 2015, 6, 6, pp 260
Abstract

Bats are an important natural reservoir for a variety of viral pathogens, including polyomaviruses (PyVs). The aims of this study were: (i) to determine which PyVs are present in bats in Indonesia and (ii) to analyze the evolutionary relationships between bat PyVs and other known PyVs. Using...

Author(s)
Kobayashi, S.; Sasaki, M.; Nakao, R.; Setiyono, A.; Handharyani, E.; Orba, Y.; Rahmadani, I.; Taha, S.; Adiani, S.; Subangkit, M.; Nakamura, I.; Kimura, T.; Sawa, H.
Publisher
Springer-Wien, Wien, Austria
Citation
Archives of Virology, 2015, 160, 4, pp 1075-1082
Abstract

Assessing the molecular characteristic of chickens is the powerful method to differentiate chicken breeds. This study analyses the matrilineal evolution of the Indonesian local chickens based on mitochondrial DNA D-loop region to reveal their genetic diversity and phylogenetic relationships. The...

Author(s)
Ulfah, M.; Perwitasari, D.; Jakaria; Muladno; Farajallah, A.
Publisher
Asian Network for Scientific Information, Faisalabad, Pakistan
Citation
International Journal of Poultry Science, 2015, 14, 11, pp 615-621

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