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Animal Science Database

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Abstract

Copy number variation (CNV) is a main and prevalent structural alterations underlying evolution of animal, which is considered to affect gene expression and complex traits. In this study, we analyzed genomic characteristics of CNV regions (CNVRs) in 254 Qinchuan cattle using GeneSeek HD 77k...

Author(s)
Huang JiePing; Li Ran; Zhang Xin; Huang YongZhen; Dang RuiHua; Lan XianYong; Chen Hong; Lei ChuZhao
Publisher
Elsevier B. V., Amsterdam, Netherlands
Citation
Livestock Science, 2017, 204, pp 88-91
Abstract

Influenza viruses are often propagated in a diverse set of culturing media and additional substitutions known as passage adaptation can cause extra evolution in the target strain, leading to ineffective vaccines. Using 25,482 H3N2 HA1 sequences curated from Global Initiative on Sharing All...

Author(s)
Chen Hui; Deng Qiang; Ng SockHoon; Lee TzeChuen [Lee, T. C. R. ]; Maurer-Stroh, S.; Zhai WeiWei
Publisher
Oxford University Press, Oxford, UK
Citation
Molecular Biology and Evolution, 2016, 33, 12, pp 3133-3143
Abstract

The DNA sequence similarity index can be used to construct a system evolutionary tree. This is based on the frequency of four kinds of bases, normal genetic similarity, the base order, the same number of corresponding bases and synthesis similarity.

Author(s)
Guo ManCai; Yuan ZhiFa; Chen Hong; Geng SheMing
Publisher
Asian Network for Biotechnology in Animal Production and Health, Haidian, China
Citation
Animal Biotechnology Bulletin, 2002, 8, 1, pp 370-372
Abstract

Domestic pigs have evolved genetic adaptations to their local environmental conditions, such as cold and hot climates. We sequenced the genomes of 69 pigs from 15 geographically divergent locations in China and detected 41 million variants, of which 21 million were absent from the dbSNP database....

Author(s)
Ai HuaShui; Fang XiaoDong; Yang Bin; Huang ZhiYong; Chen Hao; Mao LiKai; Zhang Feng; Zhang Lu; Cui LeiLei; He WeiMing; Yang Jie; Yao XiaoMing; Zhou LiSheng; Han LiJuan; Li Jing; Sun SiLong; Xie XianHua; Lai BoXian; Su Ying; Lu Yao; Yang Hui; Huang Tao; Deng WenJiang; Nielsen, R.; Ren Jun; Huang LuSheng
Publisher
Nature Publishing Group, New York, USA
Citation
Nature Genetics, 2015, 47, 3, pp 217-225
Abstract

Identification was carried out in 128 strains of Streptococcus isolated from tilapia in southern China (Guangdong, Guangxi and Hainan provinces) from 2010 to 2011 by Bio-MerieuxVITEK and 16S rRNA sequence analysis and 7 housekeeping genes were sequenced in 104 strains of S. agalactiae by Multilocus ...

Author(s)
Wang Bei; Li Yuan; Chen He; Li GuiHuan; Lu YiShan; Tang JuFeng; Cai Jia; Wu ZaoHe; Jian JiChang
Publisher
Editiorial Board of Journal of Fisheries Science, Dalian, China
Citation
Fisheries Science (Dalian), 2014, 33, 12, pp 741-749
Abstract

Based on analysis of issues of rodent control in natural grasslands in China, some strategic positions and goals on rodent control in natural grassland were expounded. The suggestions on the rodent control of natural grasslands were proposed and were as follows: the first was to quantify the...

Author(s)
Guo ZhengGang; Wang Qian; Chen He
Publisher
Editorial Board of Pratacultural Science, Lanzhou, China
Citation
Pratacultural Science, 2014, 31, 1, pp 168-172
Abstract

Insulin-like growth factor 2 (IGF2) is a fetal growth and differentiation factor that plays an important role in muscle growth and in myoblast proliferation and differentiation. The aim of this study was to examine the association of the IGF2 polymorphism with growth traits in beef cattle breed....

Author(s)
Huang YongZhen; Wang Jing; Zhan ZhaoYang; Cao XiuKai; Sun YuJia; Lan XianYong; Lei ChuZhao; Zhang ChunLei; Chen Hong
Publisher
Elsevier Ltd, Oxford, UK
Citation
Gene, 2013, 528, 2, pp 139-145
Abstract

To further probe into whether swamp buffaloes were domesticated once or multiple times in China, this survey examined the mitochondrial DNA (mtDNA) Control Region (D-loop) diversity of 471 individuals representing 22 populations of 455 Chinese swamp buffaloes and 16 river buffaloes. Phylogenetic...

Author(s)
Yue XiangPeng; Li Ran; Xie WenMei; Xu Ping; Chang, T. C.; Liu, L.; Cheng Feng; Zhang RunFeng; Lan XianYong; Chen Hong; Lei ChuZhao
Publisher
Public Library of Sciences (PLoS), San Francisco, USA
Citation
PLoS ONE, 2013, 8, 2, pp e56552
Abstract

Junctional adhesion molecule (JAM), a subfamily of immunoglobulin superfamily (IgSF) with a couple of immunoglobulin domains, can act as regulator in homeostasis and inflammation of vertebrates. In the present study, a structural homolog of JAM-A (designated CgJAM-A-L) was screened out from oyster, ...

Author(s)
Liu CongHui; Wang MengQiang; Jiang Shuai; Wang LingLing; Chen Hao; Liu ZhaoQun; Qiu LiMei; Song LinSheng
Publisher
Elsevier Ltd, Oxford, UK
Citation
Developmental and Comparative Immunology, 2016, 55, pp 211-220
Abstract

To deepen the knowledge about epidemic prevalence in the goose breeding field, a triplex PCR assay was established, and 478 samples were collected from scaled goose farms in 11 provinces in China. The results of this epidemiological investigation showed that incidence rates of H9 avian influenza...

Author(s)
Niu, X.; Wang, H.; Wei, L.; Zhang, M.; Yang, J.; Chen, H.; Tang, Y.; Diao, Y.
Publisher
Wiley, Berlin, Germany
Citation
Transboundary and Emerging Diseases, 2018, 65, 2, pp e304-e316

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